Data Management Plan

Washington Soil Health Initiative: State of the Soils Assessment

Authors

Jadey Ryan

Dani Gelardi

Published

June 14, 2024

Overview

The Washington Soil Health Initiative (WaSHI) is a partnership between the Washington State Department of Agriculture (WSDA), Washington State University (WSU), and the State Conservation Commission. WaSHI establishes a coordinated approach to healthy soil in Washington.

To date, nearly 1,000 soil samples and management surveys across 50 different cropping systems have been collected as a part of the State of the Soils Assessment (SOS). WSDA and WSU lead this project with support from staff, students, conservation districts, and agricultural professionals throughout Washington.

State of the Soils Assessment goals: 1. Assess baseline soil health. 2. Understand how climate, crop type, and management impact soil health. 3. Develop cost-effective ways for producers to assess their own soil. 4. Develop crop-specific decision-support tools.

Chapter outline

This Data Management Plan (DMP) is a living document to be continually reviewed and improved based on lessons learned, new information, and collaborator feedback. The header on the first page displays the date of the last update.

1  What is data management? describes what data management is, why it is crucial to achieve our data-driven goals, and how our data move through the data life cycle.

2  Formats & standards describes the various data formats we collect and manage. ISO standards are also described for date and geospatial data.

3  Naming conventions describes naming conventions, best practices, and examples for how we name folders and files.

4  Organization describes how we organize our folders into a hierarchical structure.

5  Storage & version control describes where we store data, what our backup policies are, how we protect our raw data, and how we use version control.

6  Documentation describes how we record each element of the data life cycle with project-level, dataset-level, and variable-level documents such as standard operating procedures, readme files, data dictionaries, etc.

7  Data flow describes how data are generated, processed, and moved from start to finish. Processes and tasks are grouped by pre, during, and post field season.

8  Data sharing describes how we protect producer privacy; how our data fits into WaTech data categories; requirements and processes for maintaining confidentiality; and our data share agreement, public access policies, and our preferred acknowledgements.

9  Code style guide describes our recommended project structures, code-specific naming conventions, script structures, and code style.

Links to shared drive folders and files

This DMP includes many links to folders and files on the shared drive, which are only accessible to WSDA staff on the state network or remotely connected using VPN (Virtual Private Networking).

Google Chrome will allow you to open the links using the Enable local file links extension that should automatically be enabled by WSDA.

However, shared drive links are not accessible when using Microsoft Edge. Nothing happens when clicking on these links. To open the file or folder, right-click on the hyperlink > copy the path > paste it into the search bar of the file explorer > press Enter or click the arrow.

Screenshots of DMP outlining the process of right-clicking a hyperlink to a shared drive folder, copying the link, and then pasting it into the file explorer, and clicking enter.

GitHub links

If you aren’t logged into a GitHub account that is part of the WSDA organization or has access to the washi-sos repository, GitHub links to specific scripts will take you to a 404 not found error page.

Roles and responsibilities

To maximize the benefits of effective data management, all WaSHI personnel who interact with SOS data must familiarize themselves with this DMP.

The WSDA Data Scientist, supported by the Co-Principal Investigators (CoPIs), is responsible for providing guidance to WaSHI staff working with SOS data and ensuring the implementation of this DMP. The Data Scientist is also responsible for reviewing and updating this document annually, and as needed. Upon updates, the Data Scientist will distribute this document to WaSHI staff and commit the source code to the GitHub repository.

Current roles
Role Affiliation Name Title
CoPI WSDA Dani Gelardi Senior Soil Scientist
CoPI WSU Deirdre Griffin LaHue Assistant Professor
Data Manager WSDA Jadey Ryan Data Scientist
Data Stewards WaSHI staff

Staff turnover

When staff leave, they take their skills, institutional knowledge, and personal understanding of their file management with them. Proper offboarding is essential to ensure knowledge isn’t lost, time isn’t wasted trying to recreate workflows, and projects keep moving.

Before the employee leaves, the Senior Soil Scientist and Data Scientist ensure that:

  • Folders and files are moved from the employee’s personal drive to the shared drive. They are named and organized according to 3  Naming conventions.
  • Workflows and specific processes the employee was responsible for are well documented.
  • Permission and ownership for the following are transferred to the appropriate remaining staff:

More resources and offboarding checklists from Harvard Research Data Management can be found in our data-management shared drive.

Acknowledgements

This DMP was adapted from the R.J. Cook Agronomy Farm Long-Term Agroecological Research Site DMP (Carlson 2021), U.S. Fish and Wildlife Service data management life cycle (U.S. Fish & Wildlife Service 2023), Harvard Medical School Longwood Research Data Management DMP guidelines (Harvard Medical School 2023), and the Data Management in Large-Scale Education Research book (Lewis 2023).